Unrooted unordered homeomorphic subtree alignment of RNA trees

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چکیده

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RNA Tree Comparisons via Unrooted Unordered Alignments

(c) Fig. S1: Homeomorphic Subtree Alignment. Dashed lines represent the alignment (a) An HSA A = {(a, a′), (b, b′), . . . , (g, g′)} between two trees T and S. The set of pruned subtrees (in green fillings) with respect to A is π(A) = { T a h , T k l , S c′ i′ } . The set of smoothed nodes (in red and waved) with respect to A is δ(A) = {k, h′}. (b) The subtrees T ′ and S′ of T and S, respective...

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ژورنال

عنوان ژورنال: Algorithms for Molecular Biology

سال: 2013

ISSN: 1748-7188

DOI: 10.1186/1748-7188-8-13